...
Unfortunately, this doesn't work on the gpubox files as written out by the legacy offline_correlator, which doesn't write out most of the metadata info that mwalib needs to correctly parse those files. I'll work on this route later.
On MWAX_CORRELATOR observation 1320412440 (SUCCESS!)
At the moment, Harry is still helping me obtain the files. As it turned out, this obs was already downloaded for Cath and the EoR team, so Harry was able to just copy them to a place I can see them on Garrawarla: /astro/mwavcs/asvo/252007. Then, running them through Hyperdrive is straightfoward:
...
This outputs hyperdrive_solutions.bin.
RTS
...
Using these solutions in vcsbeam requires >= v2.18.16.
Code Block |
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language | bash |
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theme | Midnight |
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title | Create source listPlot Hyperdrive solutions |
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$ cd /astro/mwavcs/vcs/1320499816/cal/1320499816
$ module load srclists/v1.0.0
$ wget -O 1320499816_metafits_ppds.fits http://ws.mwatelescope.org/metadata/fits?obs_id=1320499816&include_ppds=1
$ mwa_plot_calibration -m 1320499816_legacy.metafits -c 1320499816_metafits_ppds.fits -C hyperdrive_solutions.bin -R NONE -U 0,0 -O > solution.txt
$ plot_calibration.py solution.txt |
Image Added
Fingers crossed this solution is still suitable for my observation!
RTS (failed!)
Create source list
Code Block |
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language | bash |
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theme | Midnight |
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title | Create source list |
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$ cd /astro/mwavcs/vcs/1320499816/cal/1320499816
$ module load srclists/v1.0.0
$ wget -O 1320499816_metafits_ppds.fits http://ws.mwatelescope.org/metadata/fits?obs_id=1320499816&include_ppds=1
$ srclist_by_beam.py -m 1320499816_metafits_ppds.fits -n 1000 -s ${SRCLISTS_DIR}/srclist_pumav3_EoR0aegean_EoR1pietro+ForA.txt |
...
Code Block |
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language | bash |
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theme | Midnight |
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title | /astro/mwavcs/vcs/1320499816/cal/1320499816/rts/RTS_1320499816.batch |
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collapse | true |
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#!/bin/bash -l
#SBATCH --export=NONE
#SBATCH --output=/astro/mwavcs/vcs/1320499816/batch/RTS_1320499816.out
#SBATCH --account=mwavcs
#SBATCH --clusters=garrawarla
#SBATCH --partition=gpuq
#
#SBATCH --cpus-per-task=1
#SBATCH --mem-per-cpu=10240MB
#SBATCH --nice=0
#SBATCH --chdir=-nice=0
#SBATCH --chdir=/astro/mwavcs/vcs/1320499816/cal/1320499816/rts
#SBATCH --time=0:45:00
#SBATCH --nodes=13
#SBATCH --cpus-per-gpu=1
#SBATCH --gres=gpu:1
ncpus=1
export OMP_NUM_THREADS=1
module use /pawsey/mwa/software/python3/modulefiles/
module load vcstools/master
module load RTS/master
cd /astro/mwavcs/vcs/1320499816/cal/1320499816/rts
export UCX_MEMTYPE_CACHE=n
srun --export=all -N 25 -n 25 rts_gpu /astro/mwavcs/vcs/1320499816/cal/1320499816/rts/rts_1320499816.in |
Code Block |
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language | bash |
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theme | Midnight |
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title | /astro/mwavcs/vcs/1320499816/cal/1320499816/rts/rts_1320499816.in |
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collapse | true |
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ReadAllFromSingleFile=
BaseFilename=/astro/mwavcs/vcs/1318345216/cal/1318345216/vis/*_GPUBOX
ReadGpuboxDirect=0
UseCorrelatorInput=1
ReadMetafitsFile=1
MetafitsFilename=/astro/mwavcs/vcs/1318345216/1318345216
DoCalibration=
doMWArxCorrections=1
doRawDataCorrections=1
doRFIflagging=0
useFastPrimaryBeamModels=0
generateDIjones=1
applyDIcalibration=1
UsePacketInput=0
UseThreadedVI=1
MaxFrequency=170.24
ObservationFrequencyBase=138.895
ObservationTimeBase=2455846.1252314816
ObservationPointCentreHA=-0.35952189154909175
ObservationPointCentreDec=-5.98757073636307
ChannelBandwidth=0.04
NumberOfChannels=32
CorrDumpsPerCadence=128
CorrDumpTime=1.0
NumberOfIntegrationBins=6
NumberOfIterations=1
StartProcessingAt=0
ArrayPositionLat=-26.7033194
ArrayPositionLong=116.6708152
ArrayNumberOfStations=128
ArrayFile=
SourceCatalogueFile=/astro/mwavcs/vcs/1318345216/cal/1318345216/srclist_pumav3_EoR0aegean_EoR1pietro+ForA_1318345216_patch1000.txt
NumberOfCalibrators=1
NumberOfSourcesToPeel=0
calBaselineMin=20.0
calShortBaselineTaper=40.0
FieldOfViewDegrees=1 |
For an as yet unknown reason, this RTS job timed out, even after allowing 4 hours of wall time.
Beamforming
This also requires vcsbeam >= v2.18.16
Using the Hyperdrive solution (1320412440)
Code Block |
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language | bash |
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theme | Midnight |
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title | Run beamforming job |
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$ cd /astro/mwavcs/vcs/1320499816/vcsbeam/coh
$ wget -O 1320412440_metafits_ppds.fits http://ws.mwatelescope.org/metadata/fits?obs_id=1320412440&include_ppds=1
$ sbatch vcsbeam.sbatch |
Code Block |
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language | bash |
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theme | Midnight |
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title | /astro/mwavcs/vcs/1320499816/vcsbeam/coh/pointings.txt |
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collapse | true |
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00:34:08.8703 -07:21:53.409 |
Code Block |
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language | bash |
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theme | Midnight |
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title | /astro/mwavcs/vcs/1320499816 |
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| /cal/1320499816/rts
#SBATCH --time=0:45:00/vcsbeam/coh/vcsbeam.sbatchj | collapse | true |
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#!/bin/bash -l
#SBATCH --nodes=1324
#SBATCH --cpusntasks-per-gpunode=1
#SBATCH ---gres=gpu:1
ncpus=1
export OMP_NUM_THREADS=1
module use /pawsey/mwa/software/python3/modulefiles/
module load vcstools/master
module load RTS/master
cd /astro/mwavcs/vcs/1320499816/cal/1320499816/rts
export UCX_MEMTYPE_CACHE=n
srun --export=all -N 25 -n 25 rts_gpu /astro/mwavcs/vcs/1320499816/cal/1320499816/rts/rts_1320499816.in |
Code Block |
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language | bash |
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theme | Midnight |
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title | /astro/mwavcs/vcs/1320499816/cal/1320499816/rts/rts_1320499816.in |
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collapse | true |
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ReadAllFromSingleFile=
BaseFilename=cpus-per-task=1
#SBATCH --mem=370gb
#SBATCH --partition=gpuq
#SBATCH --gres=gpu:1
#SBATCH --time=01:00:00
#SBATCH --account=mwavcs
#SBATCH --nice=0
#SBATCH --export=NONE
module use /pawsey/mwa/software/python3/modulefiles
module load vcsbeam
srun -N 24 -n 24 make_mwa_tied_array_beam \
-m /astro/mwavcs/vcs/13183452161320499816/cal/1318345216/vis/*_GPUBOX
ReadGpuboxDirect=0
UseCorrelatorInput=1
ReadMetafitsFile=1
MetafitsFilename=/astro/mwavcs/vcs/1318345216/1318345216
DoCalibration=
doMWArxCorrections=1
doRawDataCorrections=1
doRFIflagging=0
useFastPrimaryBeamModels=0
generateDIjones=1
applyDIcalibration=1
UsePacketInput=0
UseThreadedVI=1
MaxFrequency=170.24
ObservationFrequencyBase=138.895
ObservationTimeBase=2455846.1252314816
ObservationPointCentreHA=-0.35952189154909175
ObservationPointCentreDec=-5.98757073636307
ChannelBandwidth=0.04
NumberOfChannels=32
CorrDumpsPerCadence=128
CorrDumpTime=1.0
NumberOfIntegrationBins=6
NumberOfIterations=1
StartProcessingAt=0
ArrayPositionLat=-26.7033194
ArrayPositionLong=116.6708152
ArrayNumberOfStations=128
ArrayFile=
SourceCatalogueFile=vcsbeam/1320499816_legacy.metafits \
-b 1320499824 \
-T 592 \
-f 109 \
-d /astro/mwavcs/vcs/1320499816/combined \
-P pointings.txt \
-c 1320412440_metafits_ppds.fits \
-C /astro/mwavcs/vcs/13183452161320499816/cal/1320412440/1318345216hyperdrive/srclist_pumav3_EoR0aegean_EoR1pietro+ForA_1318345216_patch1000.txt
NumberOfCalibrators=1
NumberOfSourcesToPeel=0
calBaselineMin=20.0
calShortBaselineTaper=40.0
FieldOfViewDegrees=1hyperdrive_solutions.bin \
-p -R NONE -U 0,0 -O |